Genomes

Strain Strain relatives OTU Status Type of genome RNA Source material Sequencing technology GenBank BioProject Reference Link to NCBI
Trebouxia aggregata Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia arboricola (val_57 = SAG 219-1A) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia australis (val_59=SAG 2205) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia angustilobata (SAG 2204) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia anticipata Under process Nuclear ✖ PacBio Revio
Trebouxia arnoldoi (val_137) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia asymmetrica (val_128 = SAG 48.88) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia corticola (UTEX 909) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
Trebouxia crenulata (val_83 = CCAP 219/2) Under process Nuclear ✖ Aposymbiotic culture PacBio Revio
ASUV 133 A01 Under process Nuclear ✔ Aposymbiotic culture PacBio
not yet assigned A02 Under process Nuclear ✖ Aposymbiotic culture
ASUV 129 SAG 2103 A03 Under process Nuclear ✔ Aposymbiotic culture PacBio
ASUV 159 A03 Under process ✖ Aposymbiotic culture
C0010 A04 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_045269315 PRJNA932175 Poquita-Du et al. 2024 ht…
ASUV 87 UTEX 784, CCAP 219/6 A06 Under process Nuclear ✖ Aposymbiotic culture
C0007 A06 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_047653755 PRJNA932175 Poquita-Du et al. 2024 ht…
C0009 A10 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_045269255 PRJNA932175 Poquita-Du et al. 2024 ht…
ASUV 128 SAG 48.88 A11 Under process Nuclear ✖
ASUV 154 A11 Under process Nuclear ✔ Aposymbiotic culture PacBio
ASUV 35 A12 Under process Nuclear ✖ Aposymbiotic culture
ASUV 83 CCAP 219/2 A13 Under process Nuclear ✖
ASUV 57 SAG 219-1A A13 Under process Nuclear ✖ Aposymbiotic culture
ASUV 79 A19 Under process Nuclear ✖ Aposymbiotic culture
ASUV 61 SAG 2009 A23 Under process Nuclear ✖ Aposymbiotic culture
ASUV 138 A25 Under process Nuclear ✖ Aposymbiotic culture
ASUV 41 UTEX B781 A33 Nuclear ✔ Aposymbiotic culture PacBio
ASV2_6044 A39 Under process Nuclear ✖ Lichen thallus Illumina HiSeq GCA_040954715 PRJNA1123266 ht…
ASV1_6018 A39 Under process Nuclear ✖ Lichen thallus Illumina HiSeq GCA_040954755 PRJNA1123266 ht…
ASUV 44 A39 Nuclear ✔ Aposymbiotic culture PacBio
ASUV 76 A46 Under process Nuclear ✖ Aposymbiotic culture
ASUV 75 A46 Under process Nuclear ✖ Aposymbiotic culture
not yet assigned A48 Under process Nuclear ✖ Aposymbiotic culture
SAG 2671 A48 Published Nuclear, Plastid, Mitochondrial ✔ Aposymbiotic culture PromethION P2 Solo (P2S) PRJEB95800 Tagirdzhanova et al. 2025 ht…
not yet assigned A52 Under process Nuclear ✖ Aposymbiotic culture
ASUV 137 A55 Under process Nuclear ✖ Aposymbiotic culture
not yet assigned A61 Under process Nuclear ✖ Aposymbiotic culture
ASUV 132 C01 Under process Nuclear ✖ Aposymbiotic culture
ASUV 80 UTEX 909 C03 Under process Nuclear ✔ Aposymbiotic culture PacBio
TZW2008 C09 Published Nuclear ✔ Aposymbiotic culture Illumina Hiseq2500 GCA_002118135 PRJDB5287 Kono et al. 2020 ht…
not yet assigned D01 Under process Nuclear ✖ Aposymbiotic culture
ASUV 86 UTEX 900, CCAP 219/7 I Under process Nuclear ✖ Aposymbiotic culture
ASUV 49 UTEX 904 I Under process Nuclear ✖ Aposymbiotic culture
ASUV 84 UTEX 181, CCAP 219/1C I03 Under process Nuclear ✖ Aposymbiotic culture
ASUV 52 UTEX 893 I04 Under process Nuclear ✔ Aposymbiotic culture PacBio
LA000220 I05 Published Nuclear ✖ Lichen thallus Illumina HiSeq GCA_000818905 PRJNA263654 Park et al. 2013 ht…
A1-2 S02 Published Nuclear ✔ Lichen thallus PacBio; Illumina MiSeq GCA_008636185 PRJNA464168 Greshake Tsovaras et al. 2020 ht…
C0004 S09 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_040206735 PRJNA790449 Puginier et al. 2024 ht…
ASUV 59 SAG 2205 S11 Under process Nuclear ✖ Aposymbiotic culture
C0006 S12 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_040206745 PRJNA790449 Puginier et al. 2024 ht…
C0005 S19 Published Nuclear ✔ Aposymbiotic culture PacBio GCA_040206755 PRJNA790449 Puginier et al. 2024 ht…
ASUV 143 S28 Under process Nuclear ✔ Aposymbiotic culture PacBio